Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823343.1_cds_XP_016501446.1_15174
CDS Infomation

[gene=LOC107819807] [db_xref=GeneID:107819807] [protein=ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic isoform X2] [protein_id=XP_016501446.1] [location=complement(join(25778..25887,26023..26307,26411..26883,27109..27194,27289..27394,27517..27845,28469..28513))] [gbkey=CDS]
Sequence

ATGGCTACCTCTGTCTCAACCATTGGAGCTGTTAACAAAGCACCGTTGAGTTTGAACAAC
TCAGTTGCTGGAACTTCAGTTCCAAGCACAGCCTTCTTTGGCAAAACTTTGAAGAAAGTG
TATGGAAAAGGTGTTTCAAGCCCCAAGGTTACAAACAAGAGCTTGAGGATTGTAGCTGAA
CAAATAGATGTTGATCCGAAGAAACAGACCGACAGTGACAGATGGAAGGGTCTTGTCCAA
GACTTCTCCGATGATCAACAGGACATCACCCGGGGTAAGGGTATGGTTGACAGTCTTTTC
CAGGCTCCAACGGGTACTGGTACTCACCACGCTGTGTTGCAATCCTACGAATACGTCAGC
CAAGGTCTTCGCCAGTACAACTTGGACAACAAGTTGGACGGATTCTACATCGCTCCTGCT
TTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCTTGAAATTGCCCAACATCAAG
GTTCCACTTATCTTGGGTATCTGGGGAGGCAAAGGTCAAGGCAAATCATTCCAGTGTGAA
CTTGTCTTCAGAAAGATGGGAATCAACCCCATTATGATGAGTGCTGGAGAATTGGAAAGT
GGAAATGCAGGAGAGCCAGCCAAGTTGATTAGGCAAAGGTACAGAGAAGCAGCAGAAATC
ATCAGAAAGGGAAATATGTGTTGCCTCTTCATCAACGATCTCGATGCAGGAGCTGGTAGA
ATGGGTGGAACTACCCAATACACTGTCAACAACCAAATGGTGAATGCCACTCTCATGAAC
ATTGCTGACAACCCGACAAATGTCCAGCTCCCCGGTATGTACAACAAGCAAGAGAATGCC
AGGGTCCCTATTATCGTCACTGGTAACGATTTCTCCACATTGTATGCTCCACTTATCCGT
GATGGTCGTATGGAGAAGTTCTACTGGGCACCAACTAGGGAAGACAGAATTGGTGTTTGC
ACAGGTATTTTCAGGACCGACAATGTTCCTGCTGAAGACGTTGTCAAGATTGTTGATAAC
TTCCCTGGACAATCTATCGACTTTTTCGGTGCACTGAGGGCGAGAGTATACGATGATGAA
GTAAGGAAGTGGGTATCAGGCACTGGAATTGAAAAGATTGGAGACAAACTTTTGAACTCT
TTTGACGGACCACCAACTTTTGAGCAACCAAAGATGACCATTGAGAAGCTCCTCGAGTAC
GGTAATATGCTTGTACAAGAGCAAGAAAATGTGAAGAGAGTTCAGTTGGCTGACAAATAC
CTCAAAGAGGCTGCACTTGGTGATGCCAATGCTGATGCCATTAACAATGGATCCTTCTTT
GCTAAAGCACAACATGTTGATCTTCCTGTTGCTGAAGGCTCTACTGATTCAATTGCAACA
AAACTTGATTCAACTTCTATGGCTGAAGATGGAAGTTATCTTTTCAAATTTTAA

Peptide Sequence

PEP ID

XP_016501446.1
PEP Infomation

PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic isoform X2 [Nicotiana tabacum]
Sequence

MATSVSTIGAVNKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAE
QIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVS
QGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCE
LVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGR
MGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIR
DGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDE
VRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKY
LKEAALGDANADAINNGSFFAKAQHVDLPVAEGSTDSIATKLDSTSMAEDGSYLFKF

Transcript Sequence

Gene sequence data has not been registered.